Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX3P78415 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.61■□□□□ 0.89
IRX3P78415 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 PMPCAP1-201ENST00000508114 1576 ntBASIC20.61■□□□□ 0.89
IRX3P78415 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.61■□□□□ 0.89
IRX3P78415 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.61■□□□□ 0.89
IRX3P78415 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
IRX3P78415 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.61■□□□□ 0.89
IRX3P78415 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.61■□□□□ 0.89
IRX3P78415 AC006557.2-201ENST00000592985 1240 ntBASIC20.61■□□□□ 0.89
IRX3P78415 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.61■□□□□ 0.89
IRX3P78415 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.61■□□□□ 0.89
IRX3P78415 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
IRX3P78415 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IRX3P78415 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 ESPNP-201ENST00000270691 2015 ntBASIC20.6■□□□□ 0.89
IRX3P78415 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 AC096633.1-201ENST00000422446 749 ntBASIC20.6■□□□□ 0.89
IRX3P78415 RPS8P6-201ENST00000426177 609 ntBASIC20.6■□□□□ 0.89
IRX3P78415 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.6■□□□□ 0.89
IRX3P78415 AC009947.1-201ENST00000444350 727 ntBASIC20.6■□□□□ 0.89
IRX3P78415 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.6■□□□□ 0.89
IRX3P78415 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 AC122714.2-201ENST00000502787 707 ntBASIC20.6■□□□□ 0.89
IRX3P78415 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 AC005593.1-201ENST00000624894 515 ntBASIC20.6■□□□□ 0.89
IRX3P78415 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
IRX3P78415 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
IRX3P78415 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
IRX3P78415 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IRX3P78415 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.59■□□□□ 0.89
IRX3P78415 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 AC112482.1-201ENST00000492080 688 ntBASIC20.59■□□□□ 0.89
IRX3P78415 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 AC002347.1-201ENST00000569543 541 ntBASIC20.59■□□□□ 0.89
IRX3P78415 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.59■□□□□ 0.89
IRX3P78415 AL139424.1-201ENST00000607572 797 ntBASIC20.59■□□□□ 0.89
IRX3P78415 AC079781.4-201ENST00000641908 219 ntBASIC20.59■□□□□ 0.89
IRX3P78415 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms