Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.2■□□□□ 0.18
CXCR4P61073 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.2■□□□□ 0.18
CXCR4P61073 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 AC116407.2-201ENST00000613639 860 ntBASIC16.2■□□□□ 0.18
CXCR4P61073 AL359736.2-201ENST00000621992 437 ntBASIC16.2■□□□□ 0.18
CXCR4P61073 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CXCR4P61073 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CXCR4P61073 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CXCR4P61073 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CXCR4P61073 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CXCR4P61073 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.19■□□□□ 0.18
CXCR4P61073 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 CA15P1-201ENST00000481698 905 ntBASIC16.19■□□□□ 0.18
CXCR4P61073 AC097488.1-201ENST00000507834 756 ntBASIC16.19■□□□□ 0.18
CXCR4P61073 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.19■□□□□ 0.18
CXCR4P61073 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.19■□□□□ 0.18
CXCR4P61073 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CXCR4P61073 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 AC026691.1-201ENST00000602502 2017 ntBASIC16.19■□□□□ 0.18
CXCR4P61073 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.19■□□□□ 0.18
CXCR4P61073 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CXCR4P61073 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CXCR4P61073 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CXCR4P61073 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCR4P61073 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CXCR4P61073 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCR4P61073 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCR4P61073 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 AC116562.2-201ENST00000507042 360 ntBASIC16.18■□□□□ 0.18
CXCR4P61073 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CXCR4P61073 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.18■□□□□ 0.18
CXCR4P61073 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms