Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 AL049840.3-201ENST00000602669 611 ntBASIC17.07■□□□□ 0.32
EPHA4P54764 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.07■□□□□ 0.32
EPHA4P54764 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
EPHA4P54764 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 BX276092.7-203ENST00000637198 1536 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 AL353593.2-201ENST00000602529 1483 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 SPDYE21P-201ENST00000413323 827 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.06■□□□□ 0.32
EPHA4P54764 LAGE3P1-201ENST00000425356 484 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 PRYP5-201ENST00000451909 266 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.06■□□□□ 0.32
EPHA4P54764 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
EPHA4P54764 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.06■□□□□ 0.32
EPHA4P54764 AC008735.5-201ENST00000623544 497 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 AC107918.4-202ENST00000641623 219 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 AC090164.3-201ENST00000610780 2143 ntBASIC17.06■□□□□ 0.32
EPHA4P54764 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
EPHA4P54764 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.06■□□□□ 0.32
EPHA4P54764 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EPHA4P54764 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
EPHA4P54764 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
EPHA4P54764 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EPHA4P54764 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EPHA4P54764 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.05■□□□□ 0.32
EPHA4P54764 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.05■□□□□ 0.32
EPHA4P54764 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.05■□□□□ 0.32
EPHA4P54764 AC116407.3-201ENST00000623905 1129 ntBASIC17.05■□□□□ 0.32
EPHA4P54764 AC073592.5-201ENST00000624854 528 ntBASIC17.05■□□□□ 0.32
EPHA4P54764 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHA4P54764 AF228730.7-201ENST00000641842 219 ntBASIC17.05■□□□□ 0.32
EPHA4P54764 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHA4P54764 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms