Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CENPFP49454 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CENPFP49454 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.88■□□□□ 0.77
CENPFP49454 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CENPFP49454 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 SPDYE22P-201ENST00000582158 798 ntBASIC19.88■□□□□ 0.77
CENPFP49454 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.88■□□□□ 0.77
CENPFP49454 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CENPFP49454 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 KLF4P1-201ENST00000412782 1185 ntBASIC19.87■□□□□ 0.77
CENPFP49454 AL805961.1-202ENST00000641562 540 ntBASIC19.87■□□□□ 0.77
CENPFP49454 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.87■□□□□ 0.77
CENPFP49454 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CENPFP49454 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CENPFP49454 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CENPFP49454 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPFP49454 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.87■□□□□ 0.77
CENPFP49454 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
CENPFP49454 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.87■□□□□ 0.77
CENPFP49454 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.86■□□□□ 0.77
CENPFP49454 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.86■□□□□ 0.77
CENPFP49454 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.86■□□□□ 0.77
CENPFP49454 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.86■□□□□ 0.77
CENPFP49454 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.86■□□□□ 0.77
CENPFP49454 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.86■□□□□ 0.77
CENPFP49454 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPFP49454 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPFP49454 FO538757.1-201ENST00000623083 1397 ntBASIC19.85■□□□□ 0.77
CENPFP49454 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPFP49454 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.85■□□□□ 0.77
CENPFP49454 AC068137.2-201ENST00000605408 478 ntBASIC19.85■□□□□ 0.77
CENPFP49454 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPFP49454 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CENPFP49454 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.85■□□□□ 0.77
CENPFP49454 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPFP49454 NME2P1-201ENST00000426182 414 ntBASIC19.85■□□□□ 0.77
CENPFP49454 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.85■□□□□ 0.77
CENPFP49454 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CENPFP49454 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CENPFP49454 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.85■□□□□ 0.77
CENPFP49454 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPFP49454 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CENPFP49454 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPFP49454 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 AC023141.13-201ENST00000604991 943 ntBASIC19.84■□□□□ 0.77
CENPFP49454 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CENPFP49454 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CENPFP49454 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CENPFP49454 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPFP49454 MIR943-201ENST00000401286 94 ntBASIC19.84■□□□□ 0.77
CENPFP49454 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms