Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TM4SF4P48230 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TM4SF4P48230 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF4P48230 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF4P48230 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.09■□□□□ 0.81
TM4SF4P48230 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.09■□□□□ 0.81
TM4SF4P48230 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 TREML5P-201ENST00000421694 576 ntBASIC20.09■□□□□ 0.81
TM4SF4P48230 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.09■□□□□ 0.81
TM4SF4P48230 RN7SL589P-201ENST00000481268 310 ntBASIC20.09■□□□□ 0.81
TM4SF4P48230 AC125807.1-201ENST00000483097 614 ntBASIC20.09■□□□□ 0.81
TM4SF4P48230 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.09■□□□□ 0.81
TM4SF4P48230 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.09■□□□□ 0.81
TM4SF4P48230 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.09■□□□□ 0.81
TM4SF4P48230 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 AC027307.3-201ENST00000594262 1100 ntBASIC20.09■□□□□ 0.81
TM4SF4P48230 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TM4SF4P48230 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TM4SF4P48230 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TM4SF4P48230 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.08■□□□□ 0.81
TM4SF4P48230 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TM4SF4P48230 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.08■□□□□ 0.81
TM4SF4P48230 ACTG1P4-201ENST00000425123 1122 ntBASIC20.08■□□□□ 0.81
TM4SF4P48230 NME2P1-201ENST00000426182 414 ntBASIC20.08■□□□□ 0.81
TM4SF4P48230 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.08■□□□□ 0.81
TM4SF4P48230 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.08■□□□□ 0.81
TM4SF4P48230 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.08■□□□□ 0.81
TM4SF4P48230 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TM4SF4P48230 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.08■□□□□ 0.8
TM4SF4P48230 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TM4SF4P48230 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
TM4SF4P48230 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TM4SF4P48230 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.07■□□□□ 0.8
TM4SF4P48230 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.07■□□□□ 0.8
TM4SF4P48230 RBPMS2P1-201ENST00000437762 623 ntBASIC20.07■□□□□ 0.8
TM4SF4P48230 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 PHGDH-209ENST00000641074 1780 ntBASIC20.07■□□□□ 0.8
TM4SF4P48230 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TM4SF4P48230 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF4P48230 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF4P48230 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TM4SF4P48230 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.06■□□□□ 0.8
TM4SF4P48230 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF4P48230 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF4P48230 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF4P48230 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF4P48230 AL158211.3-201ENST00000607385 239 ntBASIC20.06■□□□□ 0.8
TM4SF4P48230 AL390754.1-201ENST00000619088 582 ntBASIC20.06■□□□□ 0.8
TM4SF4P48230 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF4P48230 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms