Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.18■□□□□ 0.18
NR4A2P43354 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.18■□□□□ 0.18
NR4A2P43354 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NR4A2P43354 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NR4A2P43354 AC093677.2-201ENST00000600169 1863 ntBASIC16.18■□□□□ 0.18
NR4A2P43354 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NR4A2P43354 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR4A2P43354 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.18■□□□□ 0.18
NR4A2P43354 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.18■□□□□ 0.18
NR4A2P43354 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.17■□□□□ 0.18
NR4A2P43354 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
NR4A2P43354 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.17■□□□□ 0.18
NR4A2P43354 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.17■□□□□ 0.18
NR4A2P43354 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.17■□□□□ 0.18
NR4A2P43354 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.17■□□□□ 0.18
NR4A2P43354 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.17■□□□□ 0.18
NR4A2P43354 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 DOC2GP-204ENST00000639052 2548 ntBASIC16.17■□□□□ 0.18
NR4A2P43354 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.17■□□□□ 0.18
NR4A2P43354 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NR4A2P43354 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 FER1L4-210ENST00000615531 5998 ntBASIC16.16■□□□□ 0.18
NR4A2P43354 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.16■□□□□ 0.18
NR4A2P43354 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.16■□□□□ 0.18
NR4A2P43354 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.16■□□□□ 0.18
NR4A2P43354 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.16■□□□□ 0.18
NR4A2P43354 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NR4A2P43354 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.16■□□□□ 0.18
NR4A2P43354 AC007663.1-201ENST00000438948 1240 ntBASIC16.16■□□□□ 0.18
NR4A2P43354 TSPY17P-201ENST00000450329 467 ntBASIC16.16■□□□□ 0.18
NR4A2P43354 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.16■□□□□ 0.18
NR4A2P43354 AC022616.7-201ENST00000525383 220 ntBASIC16.16■□□□□ 0.18
NR4A2P43354 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.16■□□□□ 0.18
NR4A2P43354 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 CROCCP1-201ENST00000426910 5675 ntBASIC16.16■□□□□ 0.18
NR4A2P43354 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.16■□□□□ 0.18
NR4A2P43354 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.16■□□□□ 0.18
NR4A2P43354 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NR4A2P43354 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NR4A2P43354 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
NR4A2P43354 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NR4A2P43354 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NR4A2P43354 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.15■□□□□ 0.18
NR4A2P43354 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NR4A2P43354 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.15■□□□□ 0.18
NR4A2P43354 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms