Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 AC008687.5-201ENST00000593746 558 ntBASIC17.89■□□□□ 0.45
CCNFP41002 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CCNFP41002 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 NKILA-202ENST00000614771 2598 ntBASIC17.89■□□□□ 0.45
CCNFP41002 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.89■□□□□ 0.45
CCNFP41002 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCNFP41002 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCNFP41002 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
CCNFP41002 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCNFP41002 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCNFP41002 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.88■□□□□ 0.45
CCNFP41002 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 AC063952.2-201ENST00000498792 1227 ntBASIC17.88■□□□□ 0.45
CCNFP41002 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.88■□□□□ 0.45
CCNFP41002 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.88■□□□□ 0.45
CCNFP41002 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.88■□□□□ 0.45
CCNFP41002 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCNFP41002 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.88■□□□□ 0.45
CCNFP41002 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCNFP41002 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.88■□□□□ 0.45
CCNFP41002 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 DUX4L26-201ENST00000489078 1255 ntBASIC17.87■□□□□ 0.45
CCNFP41002 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
CCNFP41002 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNFP41002 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCNFP41002 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNFP41002 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCNFP41002 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.87■□□□□ 0.45
CCNFP41002 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCNFP41002 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCNFP41002 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCNFP41002 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.86■□□□□ 0.45
CCNFP41002 FAM8A6P-201ENST00000407496 1135 ntBASIC17.86■□□□□ 0.45
CCNFP41002 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms