Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLP35914 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLP35914 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLP35914 AC133963.1-201ENST00000504166 1679 ntBASIC17.67■□□□□ 0.42
HMGCLP35914 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGCLP35914 AC103564.2-201ENST00000432853 1299 ntBASIC17.67■□□□□ 0.42
HMGCLP35914 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 AC096582.2-201ENST00000510860 516 ntBASIC17.67■□□□□ 0.42
HMGCLP35914 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.67■□□□□ 0.42
HMGCLP35914 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.67■□□□□ 0.42
HMGCLP35914 AC099336.1-202ENST00000602961 463 ntBASIC17.67■□□□□ 0.42
HMGCLP35914 AC114341.1-201ENST00000618070 349 ntBASIC17.67■□□□□ 0.42
HMGCLP35914 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HMGCLP35914 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGCLP35914 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLP35914 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLP35914 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLP35914 INTS4P1-201ENST00000438455 1935 ntBASIC17.66■□□□□ 0.42
HMGCLP35914 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 HLA-J-201ENST00000462773 1622 ntBASIC17.66■□□□□ 0.42
HMGCLP35914 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.66■□□□□ 0.42
HMGCLP35914 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLP35914 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLP35914 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HMGCLP35914 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMGCLP35914 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLP35914 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCLP35914 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HMGCLP35914 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGCLP35914 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCLP35914 RCN1P2-201ENST00000398357 915 ntBASIC17.65■□□□□ 0.42
HMGCLP35914 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCLP35914 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCLP35914 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLP35914 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLP35914 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms