Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CKS2P33552 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CKS2P33552 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.1□□□□□ -0.31
CKS2P33552 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CKS2P33552 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CKS2P33552 AC004911.1-201ENST00000416316 871 ntBASIC13.1□□□□□ -0.31
CKS2P33552 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.1□□□□□ -0.31
CKS2P33552 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 AC097658.1-201ENST00000475555 843 ntBASIC13.1□□□□□ -0.31
CKS2P33552 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.1□□□□□ -0.31
CKS2P33552 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.1□□□□□ -0.31
CKS2P33552 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.1□□□□□ -0.31
CKS2P33552 AC131212.4-201ENST00000623606 975 ntBASIC13.1□□□□□ -0.31
CKS2P33552 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS2P33552 SDHAP2-201ENST00000455183 2001 ntBASIC13.1□□□□□ -0.31
CKS2P33552 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS2P33552 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 AC008741.2-201ENST00000612792 3115 ntBASIC13.09□□□□□ -0.31
CKS2P33552 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.09□□□□□ -0.31
CKS2P33552 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.09□□□□□ -0.31
CKS2P33552 AC087623.3-201ENST00000607047 1098 ntBASIC13.09□□□□□ -0.31
CKS2P33552 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.09□□□□□ -0.31
CKS2P33552 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.09□□□□□ -0.31
CKS2P33552 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CKS2P33552 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS2P33552 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS2P33552 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CKS2P33552 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CKS2P33552 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 MIR149-201ENST00000384879 89 ntBASIC13.08□□□□□ -0.32
CKS2P33552 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.08□□□□□ -0.32
CKS2P33552 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS2P33552 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS2P33552 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms