Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LSP1P33241 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LSP1P33241 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.84■□□□□ 0.45
LSP1P33241 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LSP1P33241 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.84■□□□□ 0.45
LSP1P33241 CROCCP5-201ENST00000436658 830 ntBASIC17.84■□□□□ 0.45
LSP1P33241 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.84■□□□□ 0.45
LSP1P33241 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.84■□□□□ 0.45
LSP1P33241 AC105036.2-201ENST00000569468 176 ntBASIC17.84■□□□□ 0.45
LSP1P33241 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.84■□□□□ 0.45
LSP1P33241 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.84■□□□□ 0.45
LSP1P33241 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LSP1P33241 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
LSP1P33241 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LSP1P33241 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
LSP1P33241 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.84■□□□□ 0.45
LSP1P33241 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.83■□□□□ 0.45
LSP1P33241 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
LSP1P33241 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.83■□□□□ 0.45
LSP1P33241 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 AC016396.2-201ENST00000562575 1417 ntBASIC17.83■□□□□ 0.45
LSP1P33241 AL662844.4-201ENST00000606367 2838 ntBASIC17.83■□□□□ 0.45
LSP1P33241 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LSP1P33241 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.83■□□□□ 0.44
LSP1P33241 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.83■□□□□ 0.44
LSP1P33241 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.83■□□□□ 0.44
LSP1P33241 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.83■□□□□ 0.44
LSP1P33241 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.83■□□□□ 0.44
LSP1P33241 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.83■□□□□ 0.44
LSP1P33241 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.83■□□□□ 0.44
LSP1P33241 AC004264.1-201ENST00000608354 794 ntBASIC17.83■□□□□ 0.44
LSP1P33241 AC008622.2-201ENST00000617006 1229 ntBASIC17.83■□□□□ 0.44
LSP1P33241 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.83■□□□□ 0.44
LSP1P33241 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 AC005052.1-201ENST00000625181 2492 ntBASIC17.83■□□□□ 0.44
LSP1P33241 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LSP1P33241 PAUPAR-201ENST00000630360 2965 ntBASIC17.83■□□□□ 0.44
LSP1P33241 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LSP1P33241 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.83■□□□□ 0.44
LSP1P33241 GPAT2P1-201ENST00000444924 1672 ntBASIC17.83■□□□□ 0.44
LSP1P33241 AC132938.6-201ENST00000623828 1655 ntBASIC17.83■□□□□ 0.44
LSP1P33241 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LSP1P33241 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.83■□□□□ 0.44
LSP1P33241 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LSP1P33241 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LSP1P33241 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.82■□□□□ 0.44
LSP1P33241 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LSP1P33241 AC091874.3-201ENST00000512672 1195 ntBASIC17.82■□□□□ 0.44
LSP1P33241 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.82■□□□□ 0.44
LSP1P33241 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms