Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN6P29350 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 HYMAI.1-201ENST00000620949 238 ntBASIC16.87■□□□□ 0.29
PTPN6P29350 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN6P29350 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN6P29350 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTPN6P29350 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN6P29350 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN6P29350 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN6P29350 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN6P29350 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN6P29350 KRT8P47-201ENST00000604727 1398 ntBASIC16.87■□□□□ 0.29
PTPN6P29350 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTPN6P29350 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTPN6P29350 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN6P29350 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTPN6P29350 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN6P29350 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 AC106820.2-201ENST00000563775 3264 ntBASIC16.86■□□□□ 0.29
PTPN6P29350 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PTPN6P29350 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN6P29350 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN6P29350 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN6P29350 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN6P29350 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN6P29350 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTPN6P29350 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN6P29350 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN6P29350 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN6P29350 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTPN6P29350 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN6P29350 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.85■□□□□ 0.29
PTPN6P29350 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN6P29350 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN6P29350 LINC01451-201ENST00000623792 534 ntBASIC16.85■□□□□ 0.29
PTPN6P29350 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN6P29350 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN6P29350 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN6P29350 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN6P29350 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN6P29350 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN6P29350 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms