Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RFX1P22670 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.35■□□□□ 0.69
RFX1P22670 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 AL662844.1-201ENST00000546340 181 ntBASIC19.35■□□□□ 0.69
RFX1P22670 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RFX1P22670 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 AC100803.2-201ENST00000562459 1963 ntBASIC19.35■□□□□ 0.69
RFX1P22670 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.35■□□□□ 0.69
RFX1P22670 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFX1P22670 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RFX1P22670 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RFX1P22670 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 TSPY19P-201ENST00000418461 509 ntBASIC19.34■□□□□ 0.69
RFX1P22670 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 TSPY18P-201ENST00000441642 509 ntBASIC19.34■□□□□ 0.69
RFX1P22670 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
RFX1P22670 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.34■□□□□ 0.69
RFX1P22670 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX1P22670 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RFX1P22670 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX1P22670 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFX1P22670 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
RFX1P22670 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
RFX1P22670 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.33■□□□□ 0.69
RFX1P22670 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.33■□□□□ 0.69
RFX1P22670 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
RFX1P22670 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RFX1P22670 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RFX1P22670 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RFX1P22670 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.33■□□□□ 0.68
RFX1P22670 AC079781.3-201ENST00000449110 356 ntBASIC19.33■□□□□ 0.68
RFX1P22670 AC104819.1-201ENST00000504587 486 ntBASIC19.33■□□□□ 0.68
RFX1P22670 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.33■□□□□ 0.68
RFX1P22670 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
RFX1P22670 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RFX1P22670 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.33■□□□□ 0.68
RFX1P22670 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.33■□□□□ 0.68
RFX1P22670 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RFX1P22670 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFX1P22670 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.33■□□□□ 0.68
RFX1P22670 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.32■□□□□ 0.68
RFX1P22670 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX1P22670 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms