Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL9A1P20849 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.17■□□□□ 0.5
COL9A1P20849 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.17■□□□□ 0.5
COL9A1P20849 KRT18P65-201ENST00000439811 1286 ntBASIC18.17■□□□□ 0.5
COL9A1P20849 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.17■□□□□ 0.5
COL9A1P20849 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.17■□□□□ 0.5
COL9A1P20849 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
COL9A1P20849 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 ANO7L1-203ENST00000602586 1720 ntBASIC18.17■□□□□ 0.5
COL9A1P20849 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.17■□□□□ 0.5
COL9A1P20849 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL9A1P20849 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL9A1P20849 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.16■□□□□ 0.5
COL9A1P20849 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC18.16■□□□□ 0.5
COL9A1P20849 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.16■□□□□ 0.5
COL9A1P20849 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
COL9A1P20849 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 AC091812.2-201ENST00000619081 385 ntBASIC18.16■□□□□ 0.5
COL9A1P20849 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
COL9A1P20849 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COL9A1P20849 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL9A1P20849 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL9A1P20849 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL9A1P20849 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
COL9A1P20849 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL9A1P20849 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL9A1P20849 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.15■□□□□ 0.5
COL9A1P20849 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL9A1P20849 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.15■□□□□ 0.5
COL9A1P20849 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.15■□□□□ 0.5
COL9A1P20849 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL9A1P20849 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
COL9A1P20849 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.15■□□□□ 0.5
COL9A1P20849 PIN1P1-201ENST00000412108 996 ntBASIC18.15■□□□□ 0.5
COL9A1P20849 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.15■□□□□ 0.5
COL9A1P20849 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.15■□□□□ 0.5
COL9A1P20849 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.15■□□□□ 0.5
COL9A1P20849 AC051619.7-201ENST00000568314 623 ntBASIC18.15■□□□□ 0.5
COL9A1P20849 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.15■□□□□ 0.5
COL9A1P20849 AC004877.2-201ENST00000623941 599 ntBASIC18.15■□□□□ 0.5
COL9A1P20849 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
COL9A1P20849 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.15■□□□□ 0.5
COL9A1P20849 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.15■□□□□ 0.5
COL9A1P20849 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL9A1P20849 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL9A1P20849 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.5
COL9A1P20849 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL9A1P20849 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
COL9A1P20849 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.14■□□□□ 0.49
COL9A1P20849 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.14■□□□□ 0.49
COL9A1P20849 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.14■□□□□ 0.49
COL9A1P20849 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.14■□□□□ 0.49
COL9A1P20849 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 BCYRN1-201ENST00000418539 200 ntBASIC18.14■□□□□ 0.49
COL9A1P20849 AL512638.1-201ENST00000457493 794 ntBASIC18.14■□□□□ 0.49
COL9A1P20849 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.14■□□□□ 0.49
COL9A1P20849 AC112698.1-201ENST00000510299 916 ntBASIC18.14■□□□□ 0.49
COL9A1P20849 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.14■□□□□ 0.49
COL9A1P20849 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.14■□□□□ 0.49
COL9A1P20849 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.14■□□□□ 0.49
COL9A1P20849 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL9A1P20849 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.14■□□□□ 0.49
COL9A1P20849 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms