Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SRPRAP08240 AL022326.1-202ENST00000641533 845 ntBASIC17.91■□□□□ 0.46
SRPRAP08240 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRPRAP08240 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SRPRAP08240 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRPRAP08240 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRPRAP08240 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SRPRAP08240 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.91■□□□□ 0.46
SRPRAP08240 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.9■□□□□ 0.46
SRPRAP08240 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 BCL2-203ENST00000589955 5011 ntBASIC17.9■□□□□ 0.46
SRPRAP08240 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SRPRAP08240 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.9■□□□□ 0.46
SRPRAP08240 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.9■□□□□ 0.46
SRPRAP08240 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.9■□□□□ 0.46
SRPRAP08240 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.9■□□□□ 0.46
SRPRAP08240 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SRPRAP08240 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
SRPRAP08240 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.9■□□□□ 0.46
SRPRAP08240 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.9■□□□□ 0.46
SRPRAP08240 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.9■□□□□ 0.46
SRPRAP08240 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.9■□□□□ 0.46
SRPRAP08240 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRPRAP08240 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRPRAP08240 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRPRAP08240 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SRPRAP08240 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.89■□□□□ 0.46
SRPRAP08240 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.89■□□□□ 0.46
SRPRAP08240 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 AC138028.4-201ENST00000564984 1845 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SRPRAP08240 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.89■□□□□ 0.45
SRPRAP08240 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.89■□□□□ 0.45
SRPRAP08240 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 AL020989.1-201ENST00000422979 469 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.89■□□□□ 0.45
SRPRAP08240 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.89■□□□□ 0.45
SRPRAP08240 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.89■□□□□ 0.45
SRPRAP08240 AL049840.3-201ENST00000602669 611 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 AC019129.2-201ENST00000609837 1235 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 AC107918.4-202ENST00000641623 219 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SRPRAP08240 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.89■□□□□ 0.45
SRPRAP08240 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 AC243591.1-201ENST00000452967 1364 ntBASIC17.89■□□□□ 0.45
SRPRAP08240 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRPRAP08240 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 HLA-J-201ENST00000462773 1622 ntBASIC17.88■□□□□ 0.45
SRPRAP08240 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.88■□□□□ 0.45
SRPRAP08240 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SRPRAP08240 LAGE3P1-201ENST00000425356 484 ntBASIC17.88■□□□□ 0.45
SRPRAP08240 BX005266.1-201ENST00000473402 457 ntBASIC17.88■□□□□ 0.45
SRPRAP08240 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.88■□□□□ 0.45
SRPRAP08240 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.88■□□□□ 0.45
SRPRAP08240 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRPRAP08240 AC116407.3-201ENST00000623905 1129 ntBASIC17.88■□□□□ 0.45
SRPRAP08240 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRPRAP08240 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms