Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TPM2P07951 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.26■□□□□ 0.83
TPM2P07951 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.26■□□□□ 0.83
TPM2P07951 AL023284.2-201ENST00000405850 579 ntBASIC20.26■□□□□ 0.83
TPM2P07951 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.26■□□□□ 0.83
TPM2P07951 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.26■□□□□ 0.83
TPM2P07951 MIR4651-201ENST00000582622 73 ntBASIC20.26■□□□□ 0.83
TPM2P07951 AL359736.2-201ENST00000621992 437 ntBASIC20.26■□□□□ 0.83
TPM2P07951 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TPM2P07951 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TPM2P07951 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.26■□□□□ 0.83
TPM2P07951 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TPM2P07951 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TPM2P07951 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 GMCL1P1-201ENST00000463439 1581 ntBASIC20.25■□□□□ 0.83
TPM2P07951 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 AC096733.2-201ENST00000609937 1394 ntBASIC20.25■□□□□ 0.83
TPM2P07951 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 MFAP1P1-201ENST00000442257 1255 ntBASIC20.25■□□□□ 0.83
TPM2P07951 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM2P07951 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TPM2P07951 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TPM2P07951 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM2P07951 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM2P07951 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM2P07951 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TPM2P07951 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 KRT18P29-201ENST00000397031 1267 ntBASIC20.24■□□□□ 0.83
TPM2P07951 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.24■□□□□ 0.83
TPM2P07951 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM2P07951 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.24■□□□□ 0.83
TPM2P07951 AC008622.2-201ENST00000617006 1229 ntBASIC20.24■□□□□ 0.83
TPM2P07951 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM2P07951 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM2P07951 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TPM2P07951 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM2P07951 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TPM2P07951 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM2P07951 REXO1L9P-201ENST00000604264 2108 ntBASIC20.23■□□□□ 0.83
TPM2P07951 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TPM2P07951 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TPM2P07951 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM2P07951 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM2P07951 MESTP1-201ENST00000404287 994 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms