Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CAPN1P07384 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.51■□□□□ 0.39
CAPN1P07384 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN1P07384 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN1P07384 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CAPN1P07384 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CAPN1P07384 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN1P07384 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CAPN1P07384 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.5■□□□□ 0.39
CAPN1P07384 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN1P07384 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CAPN1P07384 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN1P07384 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CAPN1P07384 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN1P07384 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CAPN1P07384 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CAPN1P07384 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN1P07384 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
CAPN1P07384 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 DUTP2-201ENST00000519164 463 ntBASIC17.49■□□□□ 0.39
CAPN1P07384 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
CAPN1P07384 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 AC092119.3-201ENST00000612618 583 ntBASIC17.49■□□□□ 0.39
CAPN1P07384 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CAPN1P07384 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CAPN1P07384 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN1P07384 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms