Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 AC009949.1-201ENST00000623048 1830 ntBASIC14.76□□□□□ -0.05
CTSDP07339 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 ABHD17AP1-201ENST00000358206 933 ntBASIC14.76□□□□□ -0.05
CTSDP07339 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 FAM197Y1-201ENST00000421178 764 ntBASIC14.76□□□□□ -0.05
CTSDP07339 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 AC116562.2-201ENST00000507042 360 ntBASIC14.76□□□□□ -0.05
CTSDP07339 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CTSDP07339 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.76□□□□□ -0.05
CTSDP07339 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.76□□□□□ -0.05
CTSDP07339 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CTSDP07339 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CTSDP07339 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CTSDP07339 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 PCDHA14-201ENST00000506751 2298 ntBASIC14.76□□□□□ -0.05
CTSDP07339 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
CTSDP07339 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CTSDP07339 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CTSDP07339 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.76□□□□□ -0.05
CTSDP07339 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 LINC00167-201ENST00000530583 1419 ntBASIC14.75□□□□□ -0.05
CTSDP07339 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CTSDP07339 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 UBALD1-205ENST00000590891 2641 ntBASIC14.75□□□□□ -0.05
CTSDP07339 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CTSDP07339 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.75□□□□□ -0.05
CTSDP07339 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.75□□□□□ -0.05
CTSDP07339 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.75□□□□□ -0.05
CTSDP07339 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.75□□□□□ -0.05
CTSDP07339 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.75□□□□□ -0.05
CTSDP07339 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.75□□□□□ -0.05
CTSDP07339 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.75□□□□□ -0.05
CTSDP07339 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CTSDP07339 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.75□□□□□ -0.05
CTSDP07339 FAM197Y4-202ENST00000622692 608 ntBASIC14.75□□□□□ -0.05
CTSDP07339 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CTSDP07339 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CTSDP07339 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CTSDP07339 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CTSDP07339 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CTSDP07339 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTSDP07339 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CTSDP07339 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CTSDP07339 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.74□□□□□ -0.05
CTSDP07339 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.74□□□□□ -0.05
CTSDP07339 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CTSDP07339 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CTSDP07339 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms