Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PMPCBO75439 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PMPCBO75439 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 IER3-202ENST00000376377 1350 ntBASIC18.06■□□□□ 0.48
PMPCBO75439 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 AL355312.1-201ENST00000407115 2176 ntBASIC18.06■□□□□ 0.48
PMPCBO75439 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.06■□□□□ 0.48
PMPCBO75439 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 BX276092.5-203ENST00000456199 560 ntBASIC18.06■□□□□ 0.48
PMPCBO75439 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PMPCBO75439 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PMPCBO75439 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PMPCBO75439 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMPCBO75439 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PMPCBO75439 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.05■□□□□ 0.48
PMPCBO75439 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PMPCBO75439 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PMPCBO75439 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.05■□□□□ 0.48
PMPCBO75439 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 RN7SL606P-201ENST00000472779 293 ntBASIC18.05■□□□□ 0.48
PMPCBO75439 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PMPCBO75439 AC090616.6-201ENST00000582640 721 ntBASIC18.05■□□□□ 0.48
PMPCBO75439 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.05■□□□□ 0.48
PMPCBO75439 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
PMPCBO75439 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
PMPCBO75439 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.05■□□□□ 0.48
PMPCBO75439 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.05■□□□□ 0.48
PMPCBO75439 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMPCBO75439 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PMPCBO75439 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.04■□□□□ 0.48
PMPCBO75439 LETM1P2-201ENST00000597330 2178 ntBASIC18.04■□□□□ 0.48
PMPCBO75439 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PMPCBO75439 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.04■□□□□ 0.48
PMPCBO75439 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.04■□□□□ 0.48
PMPCBO75439 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.04■□□□□ 0.48
PMPCBO75439 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PMPCBO75439 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms