Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNOT3O75175 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.26■□□□□ 0.35
CNOT3O75175 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNOT3O75175 MIR3652-201ENST00000579335 131 ntBASIC17.26■□□□□ 0.35
CNOT3O75175 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT3O75175 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CNOT3O75175 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CNOT3O75175 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT3O75175 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CNOT3O75175 AC008894.3-201ENST00000624324 3103 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 ANO7L1-203ENST00000602586 1720 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 AP000593.1-201ENST00000393668 712 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 DRAXINP1-201ENST00000437611 948 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.25■□□□□ 0.35
CNOT3O75175 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 GPR32P1-201ENST00000601788 811 ntBASIC17.25■□□□□ 0.35
CNOT3O75175 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.25■□□□□ 0.35
CNOT3O75175 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CNOT3O75175 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.25■□□□□ 0.35
CNOT3O75175 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.25■□□□□ 0.35
CNOT3O75175 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNOT3O75175 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CNOT3O75175 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms