Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF40O75150 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
RNF40O75150 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF40O75150 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
RNF40O75150 MIR3652-201ENST00000579335 131 ntBASIC19.2■□□□□ 0.66
RNF40O75150 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF40O75150 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RNF40O75150 AC092329.2-201ENST00000598402 547 ntBASIC19.2■□□□□ 0.66
RNF40O75150 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF40O75150 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF40O75150 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RNF40O75150 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF40O75150 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF40O75150 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF40O75150 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF40O75150 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF40O75150 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF40O75150 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
RNF40O75150 AL023284.2-201ENST00000405850 579 ntBASIC19.19■□□□□ 0.66
RNF40O75150 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF40O75150 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RNF40O75150 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF40O75150 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF40O75150 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF40O75150 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RNF40O75150 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF40O75150 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF40O75150 TSSC2-201ENST00000450217 709 ntBASIC19.18■□□□□ 0.66
RNF40O75150 AC011498.5-201ENST00000592027 486 ntBASIC19.18■□□□□ 0.66
RNF40O75150 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RNF40O75150 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF40O75150 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 AL118508.1-201ENST00000613502 2345 ntBASIC19.18■□□□□ 0.66
RNF40O75150 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF40O75150 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF40O75150 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF40O75150 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF40O75150 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF40O75150 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 BX276092.5-203ENST00000456199 560 ntBASIC19.17■□□□□ 0.66
RNF40O75150 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF40O75150 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF40O75150 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 REXO1L9P-201ENST00000604264 2108 ntBASIC19.17■□□□□ 0.66
RNF40O75150 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF40O75150 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF40O75150 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RNF40O75150 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF40O75150 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF40O75150 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF40O75150 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF40O75150 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF40O75150 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms