Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TSPAN3O60637 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TSPAN3O60637 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
TSPAN3O60637 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.3■□□□□ 0.52
TSPAN3O60637 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
TSPAN3O60637 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TSPAN3O60637 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 FAM197Y8-203ENST00000450145 560 ntBASIC18.3■□□□□ 0.52
TSPAN3O60637 AC079776.4-201ENST00000511039 504 ntBASIC18.3■□□□□ 0.52
TSPAN3O60637 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TSPAN3O60637 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.3■□□□□ 0.52
TSPAN3O60637 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TSPAN3O60637 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 AC018470.1-201ENST00000624790 3129 ntBASIC18.3■□□□□ 0.52
TSPAN3O60637 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
TSPAN3O60637 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TSPAN3O60637 AC009949.1-201ENST00000623048 1830 ntBASIC18.3■□□□□ 0.52
TSPAN3O60637 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
TSPAN3O60637 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
TSPAN3O60637 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TSPAN3O60637 BICD1-207ENST00000551848 1962 ntBASIC18.3■□□□□ 0.52
TSPAN3O60637 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
TSPAN3O60637 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.29■□□□□ 0.52
TSPAN3O60637 ABCD1P5-201ENST00000445663 754 ntBASIC18.29■□□□□ 0.52
TSPAN3O60637 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.29■□□□□ 0.52
TSPAN3O60637 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 SIRPAP1-201ENST00000448467 1770 ntBASIC18.29■□□□□ 0.52
TSPAN3O60637 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TSPAN3O60637 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.29■□□□□ 0.52
TSPAN3O60637 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TSPAN3O60637 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.28■□□□□ 0.52
TSPAN3O60637 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.28■□□□□ 0.52
TSPAN3O60637 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms