Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC28A2O43868 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC28A2O43868 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC28A2O43868 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC28A2O43868 AC140113.2-201ENST00000604370 208 ntBASIC17.14■□□□□ 0.33
SLC28A2O43868 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC28A2O43868 AC138028.4-201ENST00000564984 1845 ntBASIC17.14■□□□□ 0.33
SLC28A2O43868 AC067852.2-201ENST00000590513 2313 ntBASIC17.14■□□□□ 0.33
SLC28A2O43868 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC28A2O43868 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC28A2O43868 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC28A2O43868 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 AC073648.2-201ENST00000510116 352 ntBASIC17.13■□□□□ 0.33
SLC28A2O43868 RNA5SP419-201ENST00000515908 135 ntBASIC17.13■□□□□ 0.33
SLC28A2O43868 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SLC28A2O43868 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC28A2O43868 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC28A2O43868 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC28A2O43868 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC28A2O43868 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC28A2O43868 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC28A2O43868 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A2O43868 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A2O43868 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A2O43868 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 AL031284.1-201ENST00000419297 478 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 KRT18P23-201ENST00000435622 1283 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 FAM197Y8-203ENST00000450145 560 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A2O43868 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 AL136038.4-201ENST00000603606 1261 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 TP73-AS1-207ENST00000624167 988 ntBASIC17.12■□□□□ 0.33
SLC28A2O43868 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC28A2O43868 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC28A2O43868 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC28A2O43868 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC28A2O43868 AL163051.1-201ENST00000569214 1512 ntBASIC17.11■□□□□ 0.33
SLC28A2O43868 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC28A2O43868 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms