Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC3O15379 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.3■□□□□ 0.36
HDAC3O15379 AC024243.1-201ENST00000609234 778 ntBASIC17.3■□□□□ 0.36
HDAC3O15379 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC3O15379 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HDAC3O15379 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
HDAC3O15379 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
HDAC3O15379 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HDAC3O15379 AC016396.2-201ENST00000562575 1417 ntBASIC17.3■□□□□ 0.36
HDAC3O15379 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HDAC3O15379 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HDAC3O15379 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.29■□□□□ 0.36
HDAC3O15379 AC113404.2-201ENST00000507884 177 ntBASIC17.29■□□□□ 0.36
HDAC3O15379 AC142381.4-202ENST00000563973 229 ntBASIC17.29■□□□□ 0.36
HDAC3O15379 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.29■□□□□ 0.36
HDAC3O15379 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
HDAC3O15379 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
HDAC3O15379 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HDAC3O15379 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HDAC3O15379 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HDAC3O15379 AGGF1P2-201ENST00000426656 2106 ntBASIC17.28■□□□□ 0.36
HDAC3O15379 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC3O15379 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.28■□□□□ 0.36
HDAC3O15379 FITM1-202ENST00000559294 800 ntBASIC17.28■□□□□ 0.36
HDAC3O15379 MIR3917-201ENST00000580971 93 ntBASIC17.28■□□□□ 0.36
HDAC3O15379 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC3O15379 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HDAC3O15379 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC3O15379 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HDAC3O15379 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC3O15379 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HDAC3O15379 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC3O15379 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HDAC3O15379 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.36
HDAC3O15379 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
HDAC3O15379 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HDAC3O15379 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HDAC3O15379 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HDAC3O15379 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC3O15379 PVRIG2P-201ENST00000435460 978 ntBASIC17.27■□□□□ 0.36
HDAC3O15379 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.27■□□□□ 0.36
HDAC3O15379 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HDAC3O15379 AC092865.7-201ENST00000641832 219 ntBASIC17.27■□□□□ 0.36
HDAC3O15379 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms