Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.06■□□□□ 0.64
CEP290O15078 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEP290O15078 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEP290O15078 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CEP290O15078 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.05■□□□□ 0.64
CEP290O15078 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.05■□□□□ 0.64
CEP290O15078 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 RBPMS2P1-201ENST00000437762 623 ntBASIC19.05■□□□□ 0.64
CEP290O15078 SPDYE14P-201ENST00000442619 822 ntBASIC19.05■□□□□ 0.64
CEP290O15078 CXCL1P1-201ENST00000502804 216 ntBASIC19.05■□□□□ 0.64
CEP290O15078 AC069120.2-201ENST00000524091 540 ntBASIC19.05■□□□□ 0.64
CEP290O15078 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.05■□□□□ 0.64
CEP290O15078 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 AL133338.1-201ENST00000565695 1517 ntBASIC19.05■□□□□ 0.64
CEP290O15078 PI4KAP1-204ENST00000612579 1703 ntBASIC19.05■□□□□ 0.64
CEP290O15078 AC018445.3-201ENST00000624177 1945 ntBASIC19.05■□□□□ 0.64
CEP290O15078 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 AC100757.3-201ENST00000622361 1406 ntBASIC19.05■□□□□ 0.64
CEP290O15078 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CEP290O15078 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CEP290O15078 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.05■□□□□ 0.64
CEP290O15078 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.05■□□□□ 0.64
CEP290O15078 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.05■□□□□ 0.64
CEP290O15078 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.05■□□□□ 0.64
CEP290O15078 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.04■□□□□ 0.64
CEP290O15078 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CEP290O15078 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CEP290O15078 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CEP290O15078 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CEP290O15078 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 AL512384.1-201ENST00000406683 331 ntBASIC19.04■□□□□ 0.64
CEP290O15078 RAB43P1-201ENST00000561790 589 ntBASIC19.04■□□□□ 0.64
CEP290O15078 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.04■□□□□ 0.64
CEP290O15078 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CEP290O15078 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.04■□□□□ 0.64
CEP290O15078 GABARAPL3-202ENST00000624044 1851 ntBASIC19.04■□□□□ 0.64
CEP290O15078 AC141586.3-201ENST00000562166 1838 ntBASIC19.04■□□□□ 0.64
CEP290O15078 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 AC079140.1-201ENST00000508039 487 ntBASIC19.03■□□□□ 0.64
CEP290O15078 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CEP290O15078 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.03■□□□□ 0.64
CEP290O15078 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.03■□□□□ 0.64
CEP290O15078 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 AL671277.1-201ENST00000429656 993 ntBASIC19.03■□□□□ 0.64
CEP290O15078 AC119751.2-201ENST00000504529 210 ntBASIC19.03■□□□□ 0.64
CEP290O15078 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.03■□□□□ 0.64
CEP290O15078 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CEP290O15078 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CEP290O15078 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CEP290O15078 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CEP290O15078 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.02■□□□□ 0.64
CEP290O15078 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CEP290O15078 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.02■□□□□ 0.64
CEP290O15078 AC068587.10-201ENST00000641210 219 ntBASIC19.02■□□□□ 0.64
CEP290O15078 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 AC138969.3-201ENST00000546612 1459 ntBASIC19.02■□□□□ 0.64
CEP290O15078 AC138932.2-201ENST00000548268 1459 ntBASIC19.02■□□□□ 0.64
CEP290O15078 AC126755.4-201ENST00000549796 1459 ntBASIC19.02■□□□□ 0.64
CEP290O15078 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.02■□□□□ 0.64
CEP290O15078 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CEP290O15078 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.02■□□□□ 0.64
CEP290O15078 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.02■□□□□ 0.64
CEP290O15078 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CEP290O15078 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms