Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX1O00570 AC241585.1-201ENST00000433527 519 ntBASIC18.75■□□□□ 0.59
SOX1O00570 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.75■□□□□ 0.59
SOX1O00570 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.75■□□□□ 0.59
SOX1O00570 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.75■□□□□ 0.59
SOX1O00570 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.75■□□□□ 0.59
SOX1O00570 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 ACTL9-202ENST00000612068 1252 ntBASIC18.75■□□□□ 0.59
SOX1O00570 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.75■□□□□ 0.59
SOX1O00570 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.75■□□□□ 0.59
SOX1O00570 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 AC138969.3-201ENST00000546612 1459 ntBASIC18.75■□□□□ 0.59
SOX1O00570 AC138932.2-201ENST00000548268 1459 ntBASIC18.75■□□□□ 0.59
SOX1O00570 AC126755.4-201ENST00000549796 1459 ntBASIC18.75■□□□□ 0.59
SOX1O00570 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SOX1O00570 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
SOX1O00570 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SOX1O00570 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SOX1O00570 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.74■□□□□ 0.59
SOX1O00570 HCG4-201ENST00000418983 998 ntBASIC18.74■□□□□ 0.59
SOX1O00570 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 RN7SL589P-201ENST00000481268 310 ntBASIC18.74■□□□□ 0.59
SOX1O00570 FAM8A2P-201ENST00000528813 1142 ntBASIC18.74■□□□□ 0.59
SOX1O00570 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.74■□□□□ 0.59
SOX1O00570 TP53TG3HP-202ENST00000569755 579 ntBASIC18.74■□□□□ 0.59
SOX1O00570 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.74■□□□□ 0.59
SOX1O00570 AL162274.1-201ENST00000617191 1098 ntBASIC18.74■□□□□ 0.59
SOX1O00570 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.74■□□□□ 0.59
SOX1O00570 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SOX1O00570 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.74■□□□□ 0.59
SOX1O00570 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SOX1O00570 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
SOX1O00570 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 KLF4P1-201ENST00000412782 1185 ntBASIC18.73■□□□□ 0.59
SOX1O00570 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 SPDYE7P-202ENST00000420373 878 ntBASIC18.73■□□□□ 0.59
SOX1O00570 AC112492.5-201ENST00000421897 457 ntBASIC18.73■□□□□ 0.59
SOX1O00570 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.73■□□□□ 0.59
SOX1O00570 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.73■□□□□ 0.59
SOX1O00570 AC092552.1-201ENST00000547243 906 ntBASIC18.73■□□□□ 0.59
SOX1O00570 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.73■□□□□ 0.59
SOX1O00570 AL135744.1-201ENST00000565098 629 ntBASIC18.73■□□□□ 0.59
SOX1O00570 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.73■□□□□ 0.59
SOX1O00570 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.73■□□□□ 0.59
SOX1O00570 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.73■□□□□ 0.59
SOX1O00570 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SOX1O00570 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SOX1O00570 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SOX1O00570 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SOX1O00570 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 GNAS-203ENST00000306120 1878 ntBASIC18.72■□□□□ 0.59
SOX1O00570 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 FAM86MP-201ENST00000340703 885 ntBASIC18.72■□□□□ 0.59
SOX1O00570 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SOX1O00570 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 HAUS4P1-201ENST00000406739 1145 ntBASIC18.72■□□□□ 0.59
SOX1O00570 SPCS2P4-201ENST00000436160 681 ntBASIC18.72■□□□□ 0.59
SOX1O00570 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.72■□□□□ 0.59
SOX1O00570 INE1-201ENST00000456273 945 ntBASIC18.72■□□□□ 0.59
SOX1O00570 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SOX1O00570 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SOX1O00570 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms