Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA1AO00555 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA1AO00555 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA1AO00555 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA1AO00555 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA1AO00555 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA1AO00555 AC027369.6-201ENST00000525520 931 ntBASIC16.53■□□□□ 0.24
CACNA1AO00555 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA1AO00555 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.53■□□□□ 0.24
CACNA1AO00555 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.53■□□□□ 0.24
CACNA1AO00555 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.53■□□□□ 0.24
CACNA1AO00555 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.53■□□□□ 0.24
CACNA1AO00555 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CACNA1AO00555 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.53■□□□□ 0.24
CACNA1AO00555 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 RN7SL837P-201ENST00000463010 287 ntBASIC16.52■□□□□ 0.24
CACNA1AO00555 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.52■□□□□ 0.24
CACNA1AO00555 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.52■□□□□ 0.24
CACNA1AO00555 ALG1L8P-201ENST00000533887 760 ntBASIC16.52■□□□□ 0.24
CACNA1AO00555 AC009407.1-201ENST00000568958 598 ntBASIC16.52■□□□□ 0.24
CACNA1AO00555 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.52■□□□□ 0.24
CACNA1AO00555 AC133552.6-201ENST00000613406 534 ntBASIC16.52■□□□□ 0.24
CACNA1AO00555 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.52■□□□□ 0.24
CACNA1AO00555 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.52■□□□□ 0.24
CACNA1AO00555 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CACNA1AO00555 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CACNA1AO00555 PI4KAP1-204ENST00000612579 1703 ntBASIC16.52■□□□□ 0.23
CACNA1AO00555 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.52■□□□□ 0.23
CACNA1AO00555 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CACNA1AO00555 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CACNA1AO00555 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.52■□□□□ 0.23
CACNA1AO00555 AL355334.1-201ENST00000417713 215 ntBASIC16.52■□□□□ 0.23
CACNA1AO00555 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.52■□□□□ 0.23
CACNA1AO00555 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.52■□□□□ 0.23
CACNA1AO00555 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.52■□□□□ 0.23
CACNA1AO00555 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CACNA1AO00555 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CACNA1AO00555 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CACNA1AO00555 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CACNA1AO00555 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.52■□□□□ 0.23
CACNA1AO00555 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CACNA1AO00555 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 SIRPAP1-201ENST00000448467 1770 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CACNA1AO00555 AC007541.1-201ENST00000570282 1469 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 BNIP3P42-201ENST00000454982 569 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 BNIP3P29-201ENST00000598302 571 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 AC011447.5-201ENST00000616168 564 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CACNA1AO00555 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.51■□□□□ 0.23
CACNA1AO00555 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CACNA1AO00555 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.51■□□□□ 0.23
CACNA1AO00555 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.51■□□□□ 0.23
CACNA1AO00555 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CACNA1AO00555 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.5■□□□□ 0.23
CACNA1AO00555 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CACNA1AO00555 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CACNA1AO00555 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms