Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 FAM197Y8-203ENST00000450145 560 ntBASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 AC006538.3-201ENST00000612495 578 ntBASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMX2-CTNND1H3BSU7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TMX2-CTNND1H3BSU7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMX2-CTNND1H3BSU7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMX2-CTNND1H3BSU7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMX2-CTNND1H3BSU7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 PMS2P1-201ENST00000431037 1228 ntBASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 BNIP3P18-201ENST00000593976 575 ntBASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMX2-CTNND1H3BSU7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 AC009102.3-201ENST00000623118 1491 ntBASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 KRT18P67-201ENST00000432816 1264 ntBASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 AC096582.2-201ENST00000510860 516 ntBASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.44■□□□□ 0.38
TMX2-CTNND1H3BSU7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms