Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AC116407.2-201ENST00000613639 860 ntBASIC18■□□□□ 0.47
TBC1D3BA6NDS4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AC135776.1-201ENST00000319817 2481 ntBASIC18■□□□□ 0.47
TBC1D3BA6NDS4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
TBC1D3BA6NDS4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 AC005593.1-201ENST00000624894 515 ntBASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 AC090340.1-201ENST00000620778 4980 ntBASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
TBC1D3BA6NDS4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 PGAM5P1-201ENST00000518923 814 ntBASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
TBC1D3BA6NDS4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 AL049757.1-201ENST00000616842 1596 ntBASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.97■□□□□ 0.47
TBC1D3BA6NDS4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms