Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 RN7SL606P-201ENST00000472779 293 ntBASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 AC138894.3-201ENST00000603787 634 ntBASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 IFNL4P1-201ENST00000607083 540 ntBASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTPDC1A2A3K4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 AC004870.1-201ENST00000315132 882 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 TSPY19P-201ENST00000418461 509 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 KRT18P65-201ENST00000439811 1286 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 TSPY18P-201ENST00000441642 509 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 AL121772.3-201ENST00000610840 674 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.9■□□□□ 0.94
PTPDC1A2A3K4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPDC1A2A3K4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTPDC1A2A3K4 AL355312.1-201ENST00000407115 2176 ntBASIC20.89■□□□□ 0.94
PTPDC1A2A3K4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPDC1A2A3K4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPDC1A2A3K4 KRT8P47-201ENST00000604727 1398 ntBASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 AC091304.2-201ENST00000564639 760 ntBASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 AC099336.1-202ENST00000602961 463 ntBASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPDC1A2A3K4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 KRT17P6-201ENST00000453795 1220 ntBASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 VENTXP7-201ENST00000475503 772 ntBASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPDC1A2A3K4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PTPDC1A2A3K4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms