Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 AC073912.3-201ENST00000624414 853 ntBASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SH3PXD2BA1X283 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 BX088651.1-201ENST00000540551 451 ntBASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 KRT8P7-201ENST00000533003 1432 ntBASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SH3PXD2BA1X283 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 KRT18P23-201ENST00000435622 1283 ntBASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SH3PXD2BA1X283 AC008741.2-201ENST00000612792 3115 ntBASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3PXD2BA1X283 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms