Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC010240.3-201ENST00000607688 395 ntBASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC022898.2-201ENST00000616822 1312 ntBASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 AC106886.4-201ENST00000623557 2502 ntBASIC13.83□□□□□ -0.2
TRAV5A0A0B4J249 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AC018695.7-201ENST00000624587 2492 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ABHD17AP1-201ENST00000358206 933 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AL355355.2-201ENST00000442321 338 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 TSPY17P-201ENST00000450329 467 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 MIR3180-4-201ENST00000582223 153 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 AC113410.3-201ENST00000623366 203 ntBASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV5A0A0B4J249 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 AC009949.1-201ENST00000623048 1830 ntBASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 RPS2P55-201ENST00000397318 883 ntBASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 SLC25A1P2-201ENST00000430693 912 ntBASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 AC107956.1-201ENST00000494359 873 ntBASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms