Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AC003669.1-201ENST00000334569 611 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AC254562.1-201ENST00000417586 456 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 PRSS29P-201ENST00000440800 595 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 ALG1L5P-201ENST00000482043 771 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 RPS15P9-201ENST00000494093 319 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 AC008667.4-201ENST00000607370 168 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 C20orf181-201ENST00000623918 480 ntBASIC16.77■□□□□ 0.28
CCDC187A0A096LP49 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CCDC187A0A096LP49 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC187A0A096LP49 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 AP000974.1-201ENST00000623909 2387 ntBASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 AC132938.5-201ENST00000624980 1813 ntBASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 IGHV3-65-201ENST00000523210 341 ntBASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 BX323043.1-201ENST00000641006 1765 ntBASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 PHGDH-209ENST00000641074 1780 ntBASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC187A0A096LP49 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 BCL2-203ENST00000589955 5011 ntBASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 HCG4B-203ENST00000450128 991 ntBASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 AC092865.6-201ENST00000642101 219 ntBASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 AL049757.1-201ENST00000616842 1596 ntBASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms