Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC104819.1-201ENST00000504587 486 ntBASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 AC074051.2-201ENST00000565115 352 ntBASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 TSPY12P-201ENST00000421279 868 ntBASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 AC068472.1-201ENST00000474589 881 ntBASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HRH3Q9Y5N1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 AC100803.2-201ENST00000562459 1963 ntBASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 AL160237.2-201ENST00000556165 472 ntBASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 AC005336.2-201ENST00000593183 939 ntBASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 AC138894.3-201ENST00000603787 634 ntBASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
HRH3Q9Y5N1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms