Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC108860.2-201ENST00000562760 2183 ntBASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB3Q9Y5G1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 AC099343.3-201ENST00000605834 2503 ntBASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 AL671277.2-201ENST00000458060 996 ntBASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 AL358472.4-201ENST00000633140 710 ntBASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 LINC01126-201ENST00000623515 1646 ntBASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 KRT18P55-202ENST00000578578 1546 ntBASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB3Q9Y5G1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 FAM86EP-206ENST00000510506 987 ntBASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB3Q9Y5G1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB3Q9Y5G1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGB3Q9Y5G1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB3Q9Y5G1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGB3Q9Y5G1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 AL136038.3-201ENST00000561909 1096 ntBASIC16.89■□□□□ 0.29
PCDHGB3Q9Y5G1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms