Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 AC116407.3-201ENST00000623905 1129 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 ZNF259P1-201ENST00000407656 1365 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 MIR940-201ENST00000401276 94 ntBASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 KRT18P58-201ENST00000527480 1120 ntBASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 AC023511.2-201ENST00000618803 211 ntBASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 WIZP1-201ENST00000531444 2299 ntBASIC20.52■□□□□ 0.88
CTDP1Q9Y5B0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CTDP1Q9Y5B0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 MIR574-201ENST00000385209 96 ntBASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 AC103564.2-201ENST00000432853 1299 ntBASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 AC122714.2-201ENST00000502787 707 ntBASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 MTDHP4-201ENST00000600287 670 ntBASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 AC117500.6-201ENST00000624871 588 ntBASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTDP1Q9Y5B0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 KRT8P47-201ENST00000604727 1398 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AC092910.1-201ENST00000482027 1129 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AC106730.1-201ENST00000566722 1090 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AC116407.2-201ENST00000613639 860 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AP000867.4-201ENST00000641616 219 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms