Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.41■□□□□ 0.86
R3HCC1Q9Y3T6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 ECEL1P2-202ENST00000465689 757 ntBASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 AC010653.2-201ENST00000623505 997 ntBASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 FLJ38576-201ENST00000623820 2459 ntBASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 AC097493.4-201ENST00000641197 219 ntBASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
R3HCC1Q9Y3T6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
R3HCC1Q9Y3T6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 MST1L-201ENST00000442552 2185 ntBASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.39■□□□□ 0.85
R3HCC1Q9Y3T6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 HYMAI-201ENST00000635591 3347 ntBASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 AC007663.1-201ENST00000438948 1240 ntBASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
R3HCC1Q9Y3T6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 KRT8P3-201ENST00000519669 1449 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms