Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 AC022211.2-201ENST00000585075 2527 ntBASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 TSPY14P-201ENST00000303979 915 ntBASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 AC092865.7-201ENST00000641832 219 ntBASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MRPS28Q9Y2Q9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
MRPS28Q9Y2Q9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 AC128688.1-201ENST00000487626 519 ntBASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 EGLN1P1-201ENST00000531623 762 ntBASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 MIR3917-201ENST00000580971 93 ntBASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MRPS28Q9Y2Q9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.32■□□□□ 0.04
MRPS28Q9Y2Q9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms