Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 AL356309.3-201ENST00000624132 1934 ntBASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 AF186996.4-201ENST00000467186 377 ntBASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 AL139288.1-201ENST00000623748 933 ntBASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 AL353593.2-201ENST00000602529 1483 ntBASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 AL049757.1-201ENST00000616842 1596 ntBASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 AC073648.2-201ENST00000510116 352 ntBASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN1Q9UMX0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 SART3-203ENST00000546611 1184 ntBASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AC019129.2-201ENST00000609837 1235 ntBASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 AC073592.5-201ENST00000624854 528 ntBASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN1Q9UMX0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms