Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT11Q9UKZ1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT11Q9UKZ1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT11Q9UKZ1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT11Q9UKZ1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 MIR564-202ENST00000385049 94 ntBASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 GCSHP2-201ENST00000560971 527 ntBASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNOT11Q9UKZ1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 AL391005.1-201ENST00000623953 2435 ntBASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 HOMER2P1-201ENST00000455653 964 ntBASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 LINC01238-205ENST00000567549 1107 ntBASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT11Q9UKZ1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 AC092647.4-201ENST00000457211 535 ntBASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT11Q9UKZ1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms