Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 AC104109.2-201ENST00000602919 1418 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 HMGN1P19-201ENST00000436976 333 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 AL031598.1-201ENST00000561511 1773 ntBASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC42EP3Q9UKI2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 Z98044.1-201ENST00000632503 1764 ntBASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 HLA-J-201ENST00000462773 1622 ntBASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 PGAM5P1-201ENST00000518923 814 ntBASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.86□□□□□ -0.03
CDC42EP3Q9UKI2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 BICD1-207ENST00000551848 1962 ntBASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 TP73-AS1-210ENST00000637775 1455 ntBASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDC42EP3Q9UKI2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms