Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 AP005117.1-201ENST00000584346 1413 ntBASIC16.72■□□□□ 0.27
CTSFQ9UBX1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 AC148477.8-201ENST00000624298 468 ntBASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSFQ9UBX1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 HLA-A-201ENST00000376802 1334 ntBASIC16.71■□□□□ 0.27
CTSFQ9UBX1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.71■□□□□ 0.27
CTSFQ9UBX1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.71■□□□□ 0.27
CTSFQ9UBX1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 KRT18P67-201ENST00000432816 1264 ntBASIC16.71■□□□□ 0.27
CTSFQ9UBX1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.71■□□□□ 0.27
CTSFQ9UBX1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTSFQ9UBX1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CTSFQ9UBX1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CTSFQ9UBX1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AF186996.4-201ENST00000467186 377 ntBASIC16.7■□□□□ 0.26
CTSFQ9UBX1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AL773604.1-201ENST00000617417 272 ntBASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CTSFQ9UBX1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms