Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 AC132008.2-207ENST00000454517 770 ntBASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 AC018470.1-201ENST00000624790 3129 ntBASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPHK1Q9NYA1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 FAM220CP-201ENST00000395253 831 ntBASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 AC116407.2-201ENST00000613639 860 ntBASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 AL691432.3-201ENST00000621860 400 ntBASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK1Q9NYA1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 AC012317.2-201ENST00000623305 2251 ntBASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 COX5BP2-201ENST00000392354 334 ntBASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 LINC01711-201ENST00000598340 967 ntBASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK1Q9NYA1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms