Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AC007967.3-201ENST00000434308 558 ntBASIC18.38■□□□□ 0.53
HPS4Q9NQG7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 AP000867.4-201ENST00000641616 219 ntBASIC18.38■□□□□ 0.53
HPS4Q9NQG7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 ESPNP-201ENST00000270691 2015 ntBASIC18.38■□□□□ 0.53
HPS4Q9NQG7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPS4Q9NQG7 HLA-J-201ENST00000462773 1622 ntBASIC18.38■□□□□ 0.53
HPS4Q9NQG7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 FAM220CP-201ENST00000395253 831 ntBASIC18.37■□□□□ 0.53
HPS4Q9NQG7 AC098831.1-202ENST00000438821 336 ntBASIC18.37■□□□□ 0.53
HPS4Q9NQG7 AC092910.1-201ENST00000482027 1129 ntBASIC18.37■□□□□ 0.53
HPS4Q9NQG7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 AC007613.1-201ENST00000572811 2597 ntBASIC18.37■□□□□ 0.53
HPS4Q9NQG7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS4Q9NQG7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 PGAM5P1-201ENST00000518923 814 ntBASIC18.36■□□□□ 0.53
HPS4Q9NQG7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 AC097374.2-201ENST00000618617 1306 ntBASIC18.36■□□□□ 0.53
HPS4Q9NQG7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS4Q9NQG7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AC126763.1-201ENST00000552015 2118 ntBASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.35■□□□□ 0.53
HPS4Q9NQG7 AC034105.1-201ENST00000563488 319 ntBASIC18.35■□□□□ 0.53
HPS4Q9NQG7 MTDHP4-201ENST00000600287 670 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms