Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 AC111152.3-201ENST00000569699 673 ntBASIC18.72■□□□□ 0.59
CD248Q9HCU0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 AC005332.3-201ENST00000589904 676 ntBASIC18.72■□□□□ 0.59
CD248Q9HCU0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
CD248Q9HCU0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD248Q9HCU0 AC134043.2-201ENST00000624206 2238 ntBASIC18.72■□□□□ 0.59
CD248Q9HCU0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AL645608.8-201ENST00000606034 2086 ntBASIC18.71■□□□□ 0.59
CD248Q9HCU0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AL845331.1-201ENST00000424978 1190 ntBASIC18.71■□□□□ 0.59
CD248Q9HCU0 KRT17P6-201ENST00000453795 1220 ntBASIC18.71■□□□□ 0.59
CD248Q9HCU0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 AD000864.1-201ENST00000624076 2295 ntBASIC18.71■□□□□ 0.59
CD248Q9HCU0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD248Q9HCU0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CD248Q9HCU0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CD248Q9HCU0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD248Q9HCU0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.7■□□□□ 0.58
CD248Q9HCU0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD248Q9HCU0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.69■□□□□ 0.58
CD248Q9HCU0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms