Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 AC099568.2-201ENST00000609194 695 ntBASIC16.37■□□□□ 0.21
CHD8Q9HCK8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD8Q9HCK8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 CXCL1P1-201ENST00000502804 216 ntBASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 PI4KAP1-204ENST00000612579 1703 ntBASIC16.36■□□□□ 0.21
CHD8Q9HCK8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AL353779.1-201ENST00000434793 351 ntBASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 KRT8P44-201ENST00000441609 1350 ntBASIC16.36■□□□□ 0.21
CHD8Q9HCK8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 AC129492.6-201ENST00000611383 1305 ntBASIC16.36■□□□□ 0.21
CHD8Q9HCK8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHD8Q9HCK8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AC026120.1-201ENST00000611536 926 ntBASIC16.35■□□□□ 0.21
CHD8Q9HCK8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 ACTBP11-201ENST00000436287 1126 ntBASIC16.35■□□□□ 0.21
CHD8Q9HCK8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 SNX29P1-201ENST00000548357 1007 ntBASIC16.35■□□□□ 0.21
CHD8Q9HCK8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHD8Q9HCK8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AP006294.1-201ENST00000415407 339 ntBASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 TMEM261P1-201ENST00000604899 340 ntBASIC16.34■□□□□ 0.21
CHD8Q9HCK8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AL158211.5-201ENST00000623583 2518 ntBASIC16.34■□□□□ 0.21
CHD8Q9HCK8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AC140912.1-201ENST00000577171 1054 ntBASIC16.34■□□□□ 0.21
CHD8Q9HCK8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHD8Q9HCK8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms