Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC004263.2-201ENST00000617183 678 ntBASIC19.87■□□□□ 0.77
RNF39Q9H2S5 AC124864.1-201ENST00000623408 392 ntBASIC19.87■□□□□ 0.77
RNF39Q9H2S5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF39Q9H2S5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 KRT89P-201ENST00000620027 1478 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AC009102.3-201ENST00000623118 1491 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AC112777.1-201ENST00000540175 1423 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 MUPP-201ENST00000438111 566 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AC092647.3-201ENST00000443044 633 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 HGF-207ENST00000453018 721 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 SEPT14P1-201ENST00000458703 648 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AL139824.2-201ENST00000458731 1095 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 RPL6P8-201ENST00000490136 843 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 LYSMD2-203ENST00000558126 775 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 NPM1P43-201ENST00000558669 786 ntBASIC19.86■□□□□ 0.77
RNF39Q9H2S5 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF39Q9H2S5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 NUS1P1-201ENST00000446295 882 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC091607.1-201ENST00000490318 1060 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 MTND3P12-201ENST00000559068 328 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC119751.7-201ENST00000600494 245 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC067959.1-201ENST00000604334 379 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 OR13Z2P-201ENST00000606338 555 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC100814.1-201ENST00000606963 623 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AC027449.1-201ENST00000608890 407 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 AL592071.1-201ENST00000611956 408 ntBASIC19.85■□□□□ 0.77
RNF39Q9H2S5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF39Q9H2S5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 MTND2P6-201ENST00000455337 1030 ntBASIC19.84■□□□□ 0.77
RNF39Q9H2S5 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF39Q9H2S5 AC005632.2-201ENST00000564271 828 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms