Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 AC063952.2-201ENST00000498792 1227 ntBASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM54Q9BYV2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 LINC01311-201ENST00000565162 1445 ntBASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.58■□□□□ 0.41
TRIM54Q9BYV2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 HBZP1-201ENST00000354915 429 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 MIR662-201ENST00000384847 95 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 TSPY12P-201ENST00000421279 868 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 TMPOP1-202ENST00000424642 1267 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 KRT18P38-201ENST00000449496 1282 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 RN7SL850P-201ENST00000579959 291 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 AC012317.2-201ENST00000623305 2251 ntBASIC17.58■□□□□ 0.4
TRIM54Q9BYV2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM54Q9BYV2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms