Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.64■□□□□ 0.89
TMEM47Q9BQJ4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 AL353593.2-201ENST00000602529 1483 ntBASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 NKAPP1-205ENST00000585790 367 ntBASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 AL356309.3-201ENST00000624132 1934 ntBASIC20.63■□□□□ 0.89
TMEM47Q9BQJ4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 KRT18P67-201ENST00000432816 1264 ntBASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 RNA5SP419-201ENST00000515908 135 ntBASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM47Q9BQJ4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 HLA-A-201ENST00000376802 1334 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 RNPS1P1-201ENST00000507437 918 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 AL662844.1-201ENST00000546340 181 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 AC021087.4-201ENST00000563761 564 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 AC109462.3-201ENST00000573934 613 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 AC073592.5-201ENST00000624854 528 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 AC132938.5-201ENST00000624980 1813 ntBASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TMEM47Q9BQJ4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 AC079776.2-201ENST00000641154 1609 ntBASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM47Q9BQJ4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms