Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.75■□□□□ 0.11
VRK1Q99986 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.75■□□□□ 0.11
VRK1Q99986 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VRK1Q99986 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
VRK1Q99986 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.74■□□□□ 0.11
VRK1Q99986 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 AL357033.4-201ENST00000617703 1807 ntBASIC15.74■□□□□ 0.11
VRK1Q99986 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VRK1Q99986 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 AL121672.3-201ENST00000608644 468 ntBASIC15.74■□□□□ 0.11
VRK1Q99986 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
VRK1Q99986 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
VRK1Q99986 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 AC141586.5-201ENST00000624546 2050 ntBASIC15.74■□□□□ 0.11
VRK1Q99986 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 AC134043.2-201ENST00000624206 2238 ntBASIC15.74■□□□□ 0.11
VRK1Q99986 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VRK1Q99986 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 HEIH-201ENST00000623091 1652 ntBASIC15.73■□□□□ 0.11
VRK1Q99986 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
VRK1Q99986 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VRK1Q99986 HLA-F-220ENST00000434407 884 ntBASIC15.73■□□□□ 0.11
VRK1Q99986 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 AC092119.3-201ENST00000612618 583 ntBASIC15.73■□□□□ 0.11
VRK1Q99986 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VRK1Q99986 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.73■□□□□ 0.11
VRK1Q99986 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VRK1Q99986 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK1Q99986 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VRK1Q99986 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK1Q99986 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK1Q99986 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.72■□□□□ 0.11
VRK1Q99986 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.72■□□□□ 0.11
VRK1Q99986 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK1Q99986 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK1Q99986 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
VRK1Q99986 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK1Q99986 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK1Q99986 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms