Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 FAM210CP-201ENST00000445714 574 ntBASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 KRT18P21-201ENST00000515767 1272 ntBASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM5Q96HC4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AC002558.1-201ENST00000488906 803 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AL049597.2-201ENST00000565575 961 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AL592071.1-201ENST00000611956 408 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AC124864.1-201ENST00000623408 392 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AC125634.1-201ENST00000438758 1403 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 AC010460.3-201ENST00000511359 1579 ntBASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDLIM5Q96HC4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 AL845331.1-201ENST00000424978 1190 ntBASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 FAM86EP-206ENST00000510506 987 ntBASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 IGHV3-41-201ENST00000613121 348 ntBASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDLIM5Q96HC4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms